PROJECT NAME
GOLD Project ID
Gp0000467  
Project Name
Psychrobacter arcticus 273-4  
Other Names
  
Legacy ER Project ID
10407  
Legacy GOLD ID
Gc00278  
NCBI BioProject Name Psychrobacter arcticus 273-4
NCBI BioProject ID 9633
NCBI BioProject Accession
PRJNA9633  
NCBI Locus Tag
Psyc  
NCBI BioSample Accession
SAMN02598544  
PI James Tiedje
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Alexander Thomas on 2014-05-05
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Astrobiological
Biotechnological
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Michigan State University (USA)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Psychrotolerant heterotroph  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Entrez
Taxonomy
Database
  
Genome Publications Applied and environmental microbiology 76(7):2304-12 The genome sequence of Psychrobacter arcticus 273-4, a psychroactive Siberian permafrost bacterium, reveals mechanisms for adaptation to low-temperature growth.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Psychrobacter sp. 273-4
Analysis Projects Psychrobacter arcticus 273-4
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
43  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000467
Organism Name
Psychrobacter arcticus 273-4  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Psychrobacter  
Genus Synonyms
  
Species
Psychrobacter arcticus  
Subspecies
  
Species Synonyms
  
Strain
273-4  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 17307  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.10107  
Exemplar Name
Psychrobacter arcticus  
Taxon DOI
10.1601/tx.10107  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 259536
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Pseudomonadales  
NCBI Family
Moraxellaceae  
NCBI Genus
Psychrobacter  
NCBI Species
Psychrobacter arcticus  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Permafrost  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 690310
Genbank 16S ID AY444822
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Psychrophile  
Temperature Optimum
-2.5 - Q188620  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Pairs
Diseases None
Known Habitats Fish
Fresh water
Soil
Metabolisms
  
Phenotypes Radiation resistant
Energy Sources Heterotroph
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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