PROJECT INFORMATION
GOLD Project ID
Gp0000460  
Project Name
Streptococcus pyogenes sv. M1 MGAS5005  
Other Names
  
Legacy ER Project ID
10400  
Legacy GOLD ID
Gc00285  
NCBI BioProject Name Streptococcus pyogenes MGAS5005
NCBI BioProject ID 13888
NCBI BioProject Accession PRJNA13888
NCBI Locus Tag
M5005_Spy  
NCBI BioSample Accession SAMN02603500
PI Musser JM
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Animal Pathogen
Human Pathogen
Medical
Sequencing Center Integrated Genomics (USA)
Collaborating Institute National Institute of Allergy and Infectious Diseases (USA)
Funding Agency NIH (USA)
Project Description
To better understand the molecular events involved in the origin of new pathogenic bacteria, we studied the evolution of a highly virulent clone of serotype M1 group A Streptococcus (GAS).  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Taxonomy
Entrez
Wikipedia
Database
  
Genome Publications The Journal of infectious diseases Evolutionary origin and emergence of a highly successful clone of serotype M1 group a Streptococcus involved multiple horizontal gene transfer events.
Other Publications
  
PROJECT COMPOSITION
Study Molecular genetic anatomy of inter- and intraserotype variation in the human bacterial pathogen group A Streptococcus
Analysis Projects Streptococcus pyogenes sv. M1 MGAS5005
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
39  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000460
Organism Name
Streptococcus pyogenes sv. M1 MGAS5005  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Streptococcus  
Genus Synonyms
  
Species
Streptococcus pyogenes  
Subspecies
  
Species Synonyms
  
Strain
MGAS5005  
Strain Synonyms
  
Serovar-Biovar
M1  
Culture Collection ID
ATCC BAA-947  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
2  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 293653
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Streptococcaceae  
NCBI Genus
Streptococcus  
NCBI Species
Streptococcus pyogenes  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 493418
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
35  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Pairs
Chains
Diseases Bone infection
Endocarditis
Pneumonia
Sinusitis
Meningitis
Necrotizing fasciitis
Mastoiditis
Tonsillitis
Myositis
Otitis
Pharyngitis
Known Habitats Host
Human nasopharyngeal microflora
Metabolisms
  
Phenotypes Pathogen
Energy Sources Heterotroph

 

 

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