PROJECT NAME
GOLD Project ID
Gp0000444  
Project Name
Chlamydia trachomatis sv. A HAR-13  
Other Names
  
Legacy ER Project ID
10386  
Legacy GOLD ID
Gc00300  
NCBI BioProject Name Chlamydia trachomatis A/HAR-13
NCBI BioProject ID 13885
NCBI BioProject Accession
PRJNA13885  
NCBI Locus Tag
CTA_  
NCBI BioSample Accession
SAMN02603498  
PI Caldwell HD
Added By Nikos Kyrpides on 2007-11-27 00:00:00.0
Last Modified By Auto script update processes on 2014-03-26 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Human Pathogen
Medical
Sequencing Center Integrated Genomics (USA)
Collaborating Institute National Institute of Allergy and Infectious Diseases (USA)
Funding Agency
  
Project Description
Serovar A strain that causes pharyngitis, bronchitis and pneumonitis  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Wikipedia
Taxonomy
Database
  
Genome Publications Infection and immunity Comparative genomic analysis of Chlamydia trachomatis oculotropic and genitotropic strains.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Chlamydia trachomatis A/HAR-13
Analysis Projects Chlamydia trachomatis sv. A HAR-13
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
2-3 kb, 10-12 kb, 30-35 kb  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
41  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0000444
Organism Name
Chlamydia trachomatis sv. A HAR-13  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
CHLAMYDIAE  
Genus
Chlamydia  
Genus Synonyms
  
Species
Chlamydia trachomatis  
Subspecies
  
Species Synonyms
  
Strain
HAR-13  
Strain Synonyms
  
Serovar-Biovar
A  
Culture Collection ID
DSM 19440  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.7767  
Exemplar Name
Chlamydia trachomatis  
Taxon DOI
10.1601/tx.7767  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 315277
NCBI Kingdom
  
NCBI Phylum
Chlamydiae  
NCBI Class
Chlamydiia  
NCBI Order
Chlamydiales  
NCBI Family
Chlamydiaceae  
NCBI Genus
Chlamydia  
NCBI Species
Chlamydia trachomatis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mammals  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 621204
Genbank 16S ID D89067
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 1
Term Symbiotic
Symbiotic Physical Interaction
Endosymbiotic intracellular  
Symbiotic Relationship
Parasitic  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Bronchitis
Pharyngitis
Pneumonia
Known Habitats Host
Metabolisms
  
Phenotypes Obligate intracellular parasite
Parasite
Pathogen
Energy Sources
  

 

 

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