PROJECT INFORMATION
GOLD Project ID
Gp0000424  
Project Name
Lactobacillus sakei sakei 23K  
Other Names
  
Legacy ER Project ID
10368  
Legacy GOLD ID
Gc00318  
NCBI BioProject Name Lactobacillus sakei subsp. sakei 23K
NCBI BioProject ID 13435
NCBI BioProject Accession PRJNA13435
NCBI Locus Tag
LSA  
NCBI BioSample Accession SAMEA3138223
PI Zagorec M
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Food industry
Lactic acid production
Biotechnological
Sequencing Center National Institute for Agricultural Research (INRA) (France)
Collaborating Institute
  
Funding Agency
  
Project Description
Used in the production of fermented meat products  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Database
  
Genome Publications Nature biotechnology The complete genome sequence of the meat-borne lactic acid bacterium Lactobacillus sakei 23K.
Other Publications
  
PROJECT COMPOSITION
Study Lactobacillus sakei sakei 23K
Analysis Projects Lactobacillus sakei sakei 23K
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
1-2 kb  
Number Of Reads
15500  
Read Size
  
Vector
  
GC Percent
41  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000424
Organism Name
Lactobacillus sakei sakei 23K  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Lactobacillus  
Genus Synonyms
  
Species
Lactobacillus sakei  
Subspecies
sakei  
Species Synonyms
  
Strain
23K  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 314315
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Lactobacillaceae  
NCBI Genus
Lactobacillus  
NCBI Species
Lactobacillus sakei  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Food production  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Intestinal tract
Oral cavity
Fresh meat
Vagina
Metabolisms
  
Phenotypes Non-Pathogen
Energy Sources
  

 

 

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