PROJECT NAME
GOLD Project ID
Gp0000409  
Project Name
Salinibacter ruber M31, DSM 13855  
Other Names
  
Legacy ER Project ID
10355  
Legacy GOLD ID
Gc00331  
NCBI BioProject Name Salinibacter ruber DSM 13855
NCBI BioProject ID 16159
NCBI BioProject Accession
PRJNA16159  
NCBI Locus Tag
SRU  
NCBI BioSample Accession
SAMN02604045  
PI
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center J. Craig Venter Institute (JCVI) (USA)
Collaborating Institute
  
Funding Agency National Science Foundation (NSF) (USA)
Project Description
Extremely halophilic, strictly aerobic, red-pigmented bacterium  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Isolation
Entrez
Taxonomy
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America The genome of Salinibacter ruber: convergence and gene exchange among hyperhalophilic bacteria and archaea.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Salinibacter ruber M31, DSM 13855
Analysis Projects Salinibacter ruber M31, DSM 13855
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
2-3 kb, 8-10 kb  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
66  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0000409
Organism Name
Salinibacter ruber M31, DSM 13855  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Salinibacter  
Genus Synonyms
  
Species
Salinibacter ruber  
Subspecies
  
Species Synonyms
  
Strain
M31,DSM 13855  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 13855  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.8340  
Exemplar Name
Salinibacter ruber  
Taxon DOI
10.1601/tx.8340  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 309807
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
  
NCBI Order
Bacteroidetes Order II. Incertae sedis  
NCBI Family
Rhodothermaceae  
NCBI Genus
Salinibacter  
NCBI Species
Salinibacter ruber  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Non-marine Saline and Alkaline  
Ecosystem Subtype
Salt crystallizer ponds  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 303749
Genbank 16S ID AF323500
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
37 - 47  
Salinity
Halophile  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Ponds
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph

 

 

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