PROJECT NAME
GOLD Project ID
Gp0000406  
Project Name
Methanosphaera stadtmanae DSM 3091  
Other Names
  
Legacy ER Project ID
10352  
Legacy GOLD ID
Gi00365, Gc00334  
NCBI BioProject Name Methanosphaera stadtmanae DSM 3091
NCBI BioProject ID 15579
NCBI BioProject Accession
PRJNA15579  
NCBI Locus Tag
Msp  
NCBI BioSample Accession
SAMN02604180  
PI
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Energy production
Sequencing Center Max Planck Institute (Germany)
Collaborating Institute University of Gottingen (Germany)
Funding Agency
  
Project Description
Methanogen that uses methanol and hydrogen to produce methane  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Isolation
Entrez
Taxonomy
Database
  
Genome Publications Journal of bacteriology The genome sequence of Methanosphaera stadtmanae reveals why this human intestinal archaeon is restricted to methanol and H2 for methane formation and ATP synthesis.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Methanosphaera stadtmanae DSM 3091
Analysis Projects Methanosphaera stadtmanae DSM 3091
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
3-5 kb  
Number Of Reads
21555  
Read Size
  
Vector
pCR4-TOPO  
GC Percent
28  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000406
Organism Name
Methanosphaera stadtmanae DSM 3091  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-METHANOBACTERIA  
Genus
Methanosphaera  
Genus Synonyms
  
Species
Methanosphaera stadtmanae  
Subspecies
  
Species Synonyms
  
Strain
DSM 3091  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 3091  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.130  
Exemplar Name
Methanosphaera stadtmanae  
Taxon DOI
10.1601/tx.130  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 339860
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Methanobacteria  
NCBI Order
Methanobacteriales  
NCBI Family
Methanobacteriaceae  
NCBI Genus
Methanosphaera  
NCBI Species
Methanosphaera stadtmanae  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Large intestine  
Specific Ecosystem
Fecal  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 158297
Genbank 16S ID AY196684
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Sphere-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
36 - 40  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Pairs
Tetrads
Diseases None
Known Habitats Feces
Gastrointestinal tract
Host
Intestinal tract
Metabolisms Methanogen
Methanol reducer
Phenotypes
  
Energy Sources Lithotroph

 

 

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