PROJECT INFORMATION
GOLD Project ID
Gp0000376  
Project Name
Desulfitobacterium hafniense Y51  
Other Names
  
Legacy ER Project ID
10328  
Legacy GOLD ID
Gi00193, Gc00358  
NCBI BioProject Name Desulfitobacterium hafniense Y51
NCBI BioProject ID 16639
NCBI BioProject Accession PRJNA16639
NCBI Locus Tag
DSY  
NCBI BioSample Accession
PI Inui M
Added By Nikos Kyrpides on 2007-11-27
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Complete and Published  
Project Relevance Biotechnological
Bioremediation
Sequencing Center ANRT (France)
Kyushu University (Japan)
Collaborating Institute
  
Funding Agency
  
Project Description
Efficiently dehalogenates tetrachloroethene and polychloroethanes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Taxonomy
Entrez
Database
  
Genome Publications Journal of bacteriology Complete genome sequence of the dehalorespiring bacterium Desulfitobacterium hafniense Y51 and comparison with Dehalococcoides ethenogenes 195.
Other Publications
  
PROJECT COMPOSITION
Study Desulfitobacterium hafniense Y51
Analysis Projects Desulfitobacterium hafniense Y51
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
2 kb, 8 kb  
Number Of Reads
98319  
Read Size
  
Vector
pUC118  
GC Percent
47  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000376
Organism Name
Desulfitobacterium hafniense Y51  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Desulfitobacterium  
Genus Synonyms
  
Species
Desulfitobacterium hafniense  
Subspecies
  
Species Synonyms
  
Strain
Y51  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 138119
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Clostridiales  
NCBI Family
Peptococcaceae  
NCBI Genus
Desulfitobacterium  
NCBI Species
Desulfitobacterium hafniense  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Contaminated  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Sporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Pairs
Chains
Diseases None
Known Habitats Soil
Metabolisms Dehalogenation
Phenotypes
  
Energy Sources
  

 

 

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