PROJECT NAME
GOLD Project ID
Gp0000375  
Project Name
Rhodoferax ferrireducens T118  
Other Names
  
Legacy ER Project ID
10327  
Legacy GOLD ID
Gi01084, Gc00359  
NCBI BioProject Name Rhodoferax ferrireducens T118
NCBI BioProject ID 13908
NCBI BioProject Accession
PRJNA13908  
NCBI Locus Tag
Rfer  
NCBI BioSample Accession
SAMN02598320  
PI Lovley, Derek
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Generates electricity
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Electricity-generating, iron-reducing bacterium  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Entrez
Isolation
Taxonomy
Database
  
Genome Publications Acta dermato-venereologica Preputial ectopic sebaceous glands mimicking molluscum contagiosum.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Single Microbes GTL
Analysis Projects Rhodoferax ferrireducens T118
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
60  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0000375
Organism Name
Rhodoferax ferrireducens T118  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-BETA  
Genus
Rhodoferax  
Genus Synonyms
  
Species
Rhodoferax ferrireducens  
Subspecies
  
Species Synonyms
  
Strain
T118  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 15236  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.1831  
Exemplar Name
Albidiferax ferrireducens  
Taxon DOI
10.1601/tx.14791  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 338969
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Betaproteobacteria  
NCBI Order
Burkholderiales  
NCBI Family
Comamonadaceae  
NCBI Genus
Rhodoferax  
NCBI Species
Rhodoferax ferrireducens  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 303665
Genbank 16S ID AF435948
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
  
Temperature Optimum
25  
Salinity
  
pH
6.7-7.1  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Sediment
Metabolisms Iron reducer
Phenotypes
  
Energy Sources
  

 

 

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