PROJECT INFORMATION
GOLD Project ID
Gp0000372  
Project Name
Lactobacillus salivarius salivarius UCC118  
Other Names
  
Legacy ER Project ID
10324  
Legacy GOLD ID
Gi01470, Gc00362  
NCBI BioProject Name Lactobacillus salivarius UCC118
NCBI BioProject ID 13280
NCBI BioProject Accession PRJNA13280
NCBI Locus Tag
LSL  
NCBI BioSample Accession SAMN02604111
PI Paul O'Toole
Added By Nikos Kyrpides on 2007-11-27
Last Modified By JGI automated process on 2014-08-18
Project Comments
  
Project Status
Complete and Published  
Project Relevance Food industry
Biotechnological
Sequencing Center University College Cork (Ireland)
Collaborating Institute
  
Funding Agency
  
Project Description
Lactobacillus salivarius subsp. salivarius strain UCC118 has been extensively studied for its effectiveness as a probiotic to maintain the balance of the gut microbial flora and stimulate the intestinal immune system.   
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America Multireplicon genome architecture of Lactobacillus salivarius.
Other Publications
  
PROJECT COMPOSITION
Study Lactobacillus salivarius salivarius UCC118
Analysis Projects Lactobacillus salivarius salivarius UCC118
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
1.5 -3.0 kb, 3-5 kb  
Number Of Reads
30000  
Read Size
  
Vector
  
GC Percent
33  
Chromosome Count
1  
Plasmid Count
3  
ORGANISM NAME
GOLD Organism ID Go0000372
Organism Name
Lactobacillus salivarius salivarius UCC118  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Lactobacillus  
Genus Synonyms
  
Species
Lactobacillus salivarius  
Subspecies
salivarius  
Species Synonyms
  
Strain
UCC118  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 362948
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Lactobacillaceae  
NCBI Genus
Lactobacillus  
NCBI Species
Lactobacillus salivarius  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Intestinal tract
Host
Metabolisms Bacteriocins producer
Phenotypes Non-Pathogen
Probiotic
Energy Sources
  

 

 

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