PROJECT NAME
GOLD Project ID
Gp0000368  
Project Name
Burkholderia xenovorans LB400  
Other Names
  
Legacy ER Project ID
10321  
Legacy GOLD ID
Gi00107, Gc00365  
NCBI BioProject Name Burkholderia xenovorans LB400
NCBI BioProject ID 254
NCBI BioProject Accession
PRJNA254  
NCBI Locus Tag
Bxe  
NCBI BioSample Accession
SAMN02598451  
PI James Tiedje
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Agricultural
Bioremediation
Environmental
Human Pathogen
Medical
Plant Pathogen
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Michigan State University (USA)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Biodegrades polychlorinated biphenyls  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Entrez
International working group
Wikipedia
Bcepacia AC1100
Taxonomy
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility.
Other Publications
  
PROJECT COMPOSITION
Studies Burkholderia xenovorans LB400
Analysis Projects Burkholderia xenovorans LB400
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
3 kb, 8 kb, 40 kb  
Number Of Reads
270000  
Read Size
  
Vector
  
GC Percent
63  
Chromosome Count
3  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000368
Organism Name
Burkholderia xenovorans LB400  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-BETA  
Genus
Burkholderia  
Genus Synonyms
  
Species
Burkholderia xenovorans  
Subspecies
  
Species Synonyms
fungorum  
Strain
LB400  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
NRRL B-18064  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.8529  
Exemplar Name
Burkholderia xenovorans  
Taxon DOI
10.1601/tx.8529  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 266265
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Betaproteobacteria  
NCBI Order
Burkholderiales  
NCBI Family
Burkholderiaceae  
NCBI Genus
Paraburkholderia  
NCBI Species
Paraburkholderia xenovorans  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 374301
Genbank 16S ID U86373
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
30  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases Opportunistic infection
Known Habitats Host
Soil
Metabolisms PCB degrading
Phenotypes Pathogen
Energy Sources
  

 

 

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