PROJECT NAME
GOLD Project ID
Gp0000357  
Project Name
Cupriavidus metallidurans CH34  
Other Names
  
Legacy ER Project ID
10312  
Legacy GOLD ID
Gi00501, Gc00374  
NCBI BioProject Name Cupriavidus metallidurans CH34
NCBI BioProject ID 250
NCBI BioProject Accession
PRJNA250  
NCBI Locus Tag
Rmet  
NCBI BioSample Accession
SAMN02598450  
PI Blankenship, Robert E
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Bioremediation
Environmental
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Brookhaven National Laboratory (USA)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Extremely metal resistant bacterium  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Wikipedia
Database
  
Genome Publications PloS one 5(5):e10433 The complete genome sequence of Cupriavidus metallidurans strain CH34, a master survivalist in harsh and anthropogenic environments.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Cupriavidus metallidurans CH34
Analysis Projects Cupriavidus metallidurans CH34
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
3kb, 8kb, 40Kb  
Number Of Reads
184165  
Read Size
  
Vector
  
GC Percent
64  
Chromosome Count
1  
Plasmid Count
3  
ORGANISM NAME
GOLD Organism ID Go0000357
Organism Name
Cupriavidus metallidurans CH34  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-BETA  
Genus
Cupriavidus  
Genus Synonyms
Ralstonia  
Species
Cupriavidus metallidurans  
Subspecies
  
Species Synonyms
  
Strain
CH34  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 43123  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.1679  
Exemplar Name
Cupriavidus metallidurans  
Taxon DOI
10.1601/tx.8560  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 266264
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Betaproteobacteria  
NCBI Order
Burkholderiales  
NCBI Family
Burkholderiaceae  
NCBI Genus
Cupriavidus  
NCBI Species
Cupriavidus metallidurans  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Lentic  
Specific Ecosystem
Sediment  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 124760
Genbank 16S ID Y10824
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
30  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases None
Known Habitats Aquatic
Fresh water
Ponds
Soil
Metabolisms
  
Phenotypes Metal resistant
Energy Sources
  

 

 

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