PROJECT INFORMATION
GOLD Project ID
Gp0000330  
Project Name
Trichodesmium erythraeum IMS101  
Other Names
  
Legacy ER Project ID
10287  
Legacy GOLD ID
Gi00666, Gc00398  
NCBI BioProject Name Trichodesmium erythraeum IMS101
NCBI BioProject ID 318
NCBI BioProject Accession PRJNA318
NCBI Locus Tag
Tery  
NCBI BioSample Accession SAMN02598485
PI Falkowski, Paul
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Environmental
Biotechnological
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Woods Hole Oceanographic Institution
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Nitrogen-fixing cyanobacterium  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Entrez
Taxonomy
Cyanosite
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Trichodesmium erythraeum IMS101
Analysis Projects Trichodesmium erythraeum IMS101
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
34  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000330
Organism Name
Trichodesmium erythraeum IMS101  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
CYANOBACTERIA  
Genus
Trichodesmium  
Genus Synonyms
  
Species
Trichodesmium erythraeum  
Subspecies
  
Species Synonyms
  
Strain
IMS101  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
CCMP 1985  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 203124
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Cyanobacteria  
NCBI Class
  
NCBI Order
Oscillatoriales  
NCBI Family
Microcoleaceae  
NCBI Genus
Trichodesmium  
NCBI Species
Trichodesmium erythraeum  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Neritic zone  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 527924
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Filament-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
6 um  
Cell Length
10 - 12 um  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Filaments
Diseases None
Known Habitats Marine
Metabolisms Nitrogen fixation
Phenotypes Non-Pathogen
Energy Sources
  

 

 

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