PROJECT INFORMATION
GOLD Project ID
Gp0000328  
Project Name
Cytophaga hutchinsonii ATCC 33406  
Other Names
  
Legacy ER Project ID
10285  
Legacy GOLD ID
Gi00185, Gc00400  
NCBI BioProject Name Cytophaga hutchinsonii ATCC 33406
NCBI BioProject ID 54
NCBI BioProject Accession PRJNA54
NCBI Locus Tag
CHU  
NCBI BioSample Accession SAMN02598536
PI Mark McBride
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute ANRT (France)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Abundant soil organism that degrades cellulose  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Entrez
Taxonomy
Database
  
Genome Publications Applied and environmental microbiology Genome sequence of the cellulolytic gliding bacterium Cytophaga hutchinsonii.
Other Publications
  
PROJECT COMPOSITION
Study Cytophaga hutchinsonii ATCC 33406
Analysis Projects Cytophaga hutchinsonii ATCC 33406
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
40 kb, 8 kb, 3 kb  
Number Of Reads
105896  
Read Size
  
Vector
  
GC Percent
39  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000328
Organism Name
Cytophaga hutchinsonii ATCC 33406  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Cytophaga  
Genus Synonyms
  
Species
Cytophaga hutchinsonii  
Subspecies
  
Species Synonyms
  
Strain
ATCC 33406  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 33406  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.8271  
Exemplar Name
Cytophaga hutchinsonii ATCC 33406  
Taxon DOI
10.1601/tx.8271  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 269798
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Cytophagia  
NCBI Order
Cytophagales  
NCBI Family
Cytophagaceae  
NCBI Genus
Cytophaga  
NCBI Species
Cytophaga hutchinsonii  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 109271
Genbank 16S ID M58768
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
30  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases None
Known Habitats Marine
Aquatic
Soil
Fresh water
Metabolisms Cellulose degrader
Chitin degradation
Phenotypes Non-Pathogen
Energy Sources
  

 

 

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