PROJECT NAME
GOLD Project ID
Gp0000322  
Project Name
Clostridium perfringens ATCC 13124  
Other Names
  
Legacy ER Project ID
10280  
Legacy GOLD ID
Gi00160, Gc00406  
NCBI BioProject Name Clostridium perfringens ATCC 13124
NCBI BioProject ID 304
NCBI BioProject Accession PRJNA304
NCBI Locus Tag
CPF  
NCBI BioSample Accession SAMN02604008
PI Paulsen I
Added By Nikos Kyrpides on 2007-11-27
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Poultry Pathogen
Animal Pathogen
Biothreat
Swine Pathogen
Human Pathogen
Medical
Sequencing Center J. Craig Venter Institute (JCVI) (USA)
Collaborating Institute
  
Funding Agency National Institute of Allergy and Infectious Diseases (USA)
Project Description
Causative agent of gas gangrene.  
Project Information Visibility Public
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Wikipedia
Database
  
Genome Publications Genome research Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens.
Other Publications
  
PROJECT COMPOSITION
Study Clostridium perfringens ATCC 13124
Analysis Projects Clostridium perfringens ATCC 13124
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
28  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000322
Organism Name
Clostridium perfringens ATCC 13124  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Clostridium  
Genus Synonyms
  
Species
Clostridium perfringens  
Subspecies
  
Species Synonyms
  
Strain
ATCC 13124  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 13124  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.3991  
Exemplar Name
Clostridium perfringens  
Taxon DOI
10.1601/tx.3991  
Biosafety Level
2  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 195103
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Clostridiales  
NCBI Family
Clostridiaceae  
NCBI Genus
Clostridium  
NCBI Species
Clostridium perfringens  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mammals  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 7940
Genbank 16S ID M59103
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Obligate anaerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Sporulating  
Temperature Range
Mesophile  
Temperature Optimum
37  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Pairs
Chains
Diseases Gas gangrene
Dysenteria
Enterotoxemia
Food poisoning
Enterocolitis
Known Habitats Soil
Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources Chemoorganotroph

 

 

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