PROJECT INFORMATION
GOLD Project ID
Gp0000321  
Project Name
Rhodococcus jostii RHA1  
Other Names
  
Legacy ER Project ID
10279  
Legacy GOLD ID
Gi00996, Gc00407  
NCBI BioProject Name Rhodococcus jostii RHA1
NCBI BioProject ID 13693
NCBI BioProject Accession PRJNA13693
NCBI Locus Tag
RHA1  
NCBI BioSample Accession SAMN02604146
PI Eltis L
Added By Nikos Kyrpides on 2007-11-27
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Complete and Published  
Project Relevance Environmental
Bioremediation
Ecological
Sequencing Center Genome British Columbia (Canada)
Collaborating Institute
  
Funding Agency Genome Canada (Canada)
Genome British Columbia (Canada)
Project Description
Microbe capable of degrading a wide variety of polychlorinated biphenyls  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Wikipedia
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse.
Other Publications
  
PROJECT COMPOSITION
Study Rhodococcus jostii RHA1
Analysis Projects Rhodococcus jostii RHA1
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
2-3 kb, 40 kb  
Number Of Reads
154878  
Read Size
  
Vector
  
GC Percent
67  
Chromosome Count
1  
Plasmid Count
3  
ORGANISM NAME
GOLD Organism ID Go0000321
Organism Name
Rhodococcus jostii RHA1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Rhodococcus  
Genus Synonyms
  
Species
Rhodococcus jostii  
Subspecies
  
Species Synonyms
  
Strain
RHA1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 101510
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Corynebacteriales  
NCBI Family
Nocardiaceae  
NCBI Genus
Rhodococcus  
NCBI Species
Rhodococcus jostii  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Contaminated  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
30  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Filaments
Diseases None
Known Habitats Soil
Terrestrial
Metabolisms PCB degrading
Phenotypes
  
Energy Sources
  

 

 

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