PROJECT INFORMATION
GOLD Project ID
Gp0000309  
Project Name
Rhodobacter sphaeroides 2.4.1, ATCC BAA-808  
Other Names
  
Legacy ER Project ID
10269  
Legacy GOLD ID
Gi00508, Gc00417  
NCBI BioProject Name Rhodobacter sphaeroides 2.4.1
NCBI BioProject ID 56
NCBI BioProject Accession PRJNA56
NCBI Locus Tag
RSP  
NCBI BioSample Accession SAMN02598537
PI samuel kaplan
Added By Nikos Kyrpides on 2007-11-27
Last Modified By JGI automated process on 2014-05-20
Project Comments
  
Project Status
Complete and Published  
Project Relevance Environmental
Biotechnological
Energy production
Bioremediation
Sequencing Center National Center for Biotechnology Information (NCBI) (USA)
The Rhodobacter sphaeroides Genome Consortium
DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute University of Texas, Houston (USA)
Funding Agency NIH (USA)
U.S. Department of Energy (DOE) (USA)
Project Description
Metabolically diverse phototrophic bacterium  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Reference
Entrez
Taxonomy
Database
  
Genome Publications Journal of bacteriology Genome analyses of three strains of Rhodobacter sphaeroides: evidence of rapid evolution of chromosome II.
Other Publications
  
PROJECT COMPOSITION
Study Rhodobacter sphaeroides 2.4.1
Analysis Projects Rhodobacter sphaeroides 2.4.1, ATCC BAA-808
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
69  
Chromosome Count
2  
Plasmid Count
5  
ORGANISM NAME
GOLD Organism ID Go0000309
Organism Name
Rhodobacter sphaeroides 2.4.1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Rhodobacter  
Genus Synonyms
  
Species
Rhodobacter sphaeroides  
Subspecies
  
Species Synonyms
  
Strain
2.4.1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC BAA-808  
Type Strain
No  
Exemplar DOI
10.1601/ex.1507  
Exemplar Name
Rhodobacter sphaeroides  
Taxon DOI
10.1601/tx.1044  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 272943
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodobacterales  
NCBI Family
Rhodobacteraceae  
NCBI Genus
Rhodobacter  
NCBI Species
Rhodobacter sphaeroides  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 240801
Genbank 16S ID DQ342321
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
25 - 35  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Chains
Diseases None
Known Habitats
  
Metabolisms
  
Phenotypes Non-Pathogen
Energy Sources Photosynthetic
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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