PROJECT NAME
GOLD Project ID
Gp0000303  
Project Name
Granulibacter bethesdensis CGDNIH1  
Other Names
  
Legacy ER Project ID
10263  
Legacy GOLD ID
Gi01540, Gc00423  
NCBI BioProject Name Granulibacter bethesdensis CGDNIH1
NCBI BioProject ID 17111
NCBI BioProject Accession
PRJNA17111  
NCBI Locus Tag
GbCGDNIH1  
NCBI BioSample Accession
SAMN02603769  
PI Holland SM
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Comparative analysis
Human Pathogen
Medical
Sequencing Center Integrated Genomics (USA)
Collaborating Institute National Institute of Allergy and Infectious Diseases (USA)
Funding Agency NIH (USA)
Project Description
Isolated from a patient with chronic granulomatous disease  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Isolation
Taxonomy
Database
  
Genome Publications Journal of bacteriology Genome sequence analysis of the emerging human pathogenic acetic acid bacterium Granulibacter bethesdensis.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Granulibacter bethesdensis CGDNIH
Analysis Projects Granulibacter bethesdensis CGDNIH1
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
2-3 Kb  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
59  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000303
Organism Name
Granulibacter bethesdensis CGDNIH1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Granulibacter  
Genus Synonyms
  
Species
Granulibacter bethesdensis  
Subspecies
  
Species Synonyms
  
Strain
CGDNIH1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 17861  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.10752  
Exemplar Name
Granulibacter bethesdensis  
Taxon DOI
10.1601/tx.10752  
Biosafety Level
2  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 391165
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodospirillales  
NCBI Family
Acetobacteraceae  
NCBI Genus
Granulibacter  
NCBI Species
Granulibacter bethesdensis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 689850
Genbank 16S ID AY788950
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
35  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Chronic granulomatous
Known Habitats Host
Lymph nodes
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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