PROJECT INFORMATION
GOLD Project ID
Gp0000298  
Project Name
Syntrophomonas wolfei Goettingen, DSM 2245B  
Other Names
  
Legacy ER Project ID
10259  
Legacy GOLD ID
Gi00643, Gc00427  
NCBI BioProject Name Syntrophomonas wolfei subsp. wolfei str. Goettingen
NCBI BioProject ID 13014
NCBI BioProject Accession PRJNA13014
NCBI Locus Tag
Swol  
NCBI BioSample Accession SAMN02598286
PI Michael McInerney
Added By Nikos Kyrpides on 2007-11-27
Last Modified By JGI automated process on 2014-08-18
Project Comments
  
Project Status
Complete and Published  
Project Relevance Carbon cycle
Environmental
Biotechnological
Energy production
Bioremediation
Hydrogen production
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Anaerobic syntrophic fatty acid-oxidizing bacterium  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications 20482737
Other Publications
  
PROJECT COMPOSITION
Study Methanogenic Syntropic Consortium
Analysis Projects Syntrophomonas wolfei Goettingen, DSM 2245B
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
45  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000298
Organism Name
Syntrophomonas wolfei Goettingen, DSM 2245B  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Syntrophomonas  
Genus Synonyms
  
Species
Syntrophomonas wolfei  
Subspecies
wolfei  
Species Synonyms
  
Strain
Goettingen  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 2245B  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.4464  
Exemplar Name
Syntrophomonas wolfei  
Taxon DOI
10.1601/tx.11093  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 335541
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Clostridiales  
NCBI Family
Syntrophomonadaceae  
NCBI Genus
Syntrophomonas  
NCBI Species
Syntrophomonas wolfei  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Biotransformation  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 157804
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Spiral-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Pairs
Diseases None
Known Habitats Sludge
Wastewater
Metabolisms Fatty-acid-oxidizer
Phenotypes Nonphototrophic
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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