PROJECT NAME
GOLD Project ID
Gp0000297  
Project Name
Hyphomonas neptunium ATCC 15444  
Other Names
  
Legacy ER Project ID
10258  
Legacy GOLD ID
Gi00302, Gc00428  
NCBI BioProject Name Hyphomonas neptunium ATCC 15444
NCBI BioProject ID 15721
NCBI BioProject Accession
PRJNA15721  
NCBI Locus Tag
HNE  
NCBI BioSample Accession
SAMN02604041  
PI Badger J
Added By Nikos Kyrpides on 2007-11-27 00:00:00.0
Last Modified By Auto script update processes on 2014-03-26 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center J. Craig Venter Institute (JCVI) (USA)
Collaborating Institute University of Georgia (USA)
Funding Agency National Science Foundation (NSF) (USA)
Project Description
Dimorphic prosthecate aquatic bacterium  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Database
  
Genome Publications Journal of bacteriology Comparative genomic evidence for a close relationship between the dimorphic prosthecate bacteria Hyphomonas neptunium and Caulobacter crescentus.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Hyphomonas neptunium ATCC 15444
Analysis Projects Hyphomonas neptunium ATCC 15444
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
2-4, 10-12  
Number Of Reads
41461  
Read Size
  
Vector
  
GC Percent
62  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000297
Organism Name
Hyphomonas neptunium ATCC 15444  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Hyphomonas  
Genus Synonyms
  
Species
Hyphomonas neptunium  
Subspecies
  
Species Synonyms
  
Strain
ATCC 15444  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 15444  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.1524  
Exemplar Name
Hyphomonas neptunium  
Taxon DOI
10.1601/tx.1068  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 228405
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodobacterales  
NCBI Family
Hyphomonadaceae  
NCBI Genus
Hyphomonas  
NCBI Species
Hyphomonas neptunium  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 98403
Genbank 16S ID AF082798
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
37  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases None
Known Habitats Aquatic
Marine
Metabolisms
  
Phenotypes Budding
Non-Pathogen
Energy Sources
  

 

 

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