PROJECT INFORMATION | |
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GOLD Project ID
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Gp0000291
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Project Name
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Pseudomonas aeruginosa UCBPP-PA14
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Other Names
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Legacy ER Project ID
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10254
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Legacy GOLD ID
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Gi00489, Gc00432
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NCBI BioProject Name | Pseudomonas aeruginosa UCBPP-PA14 |
NCBI BioProject ID
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386 |
NCBI BioProject Accession
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PRJNA386 |
NCBI Locus Tag
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PA14
|
NCBI BioSample Accession
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SAMN02603591 |
PI | Ausubel FM |
Added By |
Nikos Kyrpides
on 2007-11-27 |
Last Modified By |
JGI automated process
on 2014-03-26 |
Project Comments |
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Project Status
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Complete and Published
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Project Relevance
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Animal Pathogen Plant Pathogen Human Pathogen Medical |
Sequencing Center
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Korea Research Institute of Bioscience and Biotechnology
(South Korea)
|
Collaborating Institute
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Funding Agency
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Project Description
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Excellent model for the study of pathogenesis and biofilm formation. Cellular features
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Project Information Visibility
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Public |
PROJECT TYPE | |
Specimen
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Organism |
Nucleic Acid
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DNA |
Sequencing Strategy
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Whole Genome Sequencing
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EXTERNAL PROJECT LINKS | |
Project Information
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Database
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Genome Publications
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Genome biology
Genomic analysis reveals that Pseudomonas aeruginosa virulence is combinatorial.
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Other Publications
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PROJECT COMPOSITION | |
Study |
Pseudomonas aeruginosa UCBPP-PA14 |
Organism |
Pseudomonas aeruginosa UCBPP-PA14 |
Analysis Projects |
Pseudomonas aeruginosa UCBPP-PA14 |
Number of Analysis Projects |
1 |
Number of DAPs |
0
|
SEQUENCING INFORMATION | |
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Sequencing Status
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Complete |
Sequencing Quality (MIGS-31) |
Level 6: Finished |
Finishing Goal
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Level 6: Finished |
Sequencing Comments
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|
Sequencing Technology
(MIGS-29)
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Sanger |
Library Method
(MIGS-28)
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2-4 kb
|
Number Of Reads
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|
Read Size
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Vector
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|
GC Percent |
66
|
Chromosome Count |
1
|
Plasmid Count |
0
|
ORGANISM NAME | |
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GOLD Organism ID |
Go0000291 |
Organism Name |
Pseudomonas aeruginosa UCBPP-PA14
|
Other names (alias, synonyms, short names, common names) |
|
Organism Domain |
BACTERIAL
|
Phylogeny |
PROTEOBACTERIA-GAMMA
|
Genus |
Pseudomonas
|
Genus Synonyms |
|
Species |
Pseudomonas aeruginosa
|
Subspecies |
|
Species Synonyms |
|
Strain |
UCBPP-PA14
|
Strain Synonyms |
|
Serovar-Biovar |
|
Culture Collection ID |
|
Type Strain |
Unknown
|
Exemplar DOI |
|
Exemplar Name |
|
Taxon DOI |
|
Biosafety Level |
|
Organism Comments |
|
Cultured |
Yes
|
Culture Type |
Isolate
|
Organism Type |
Natural
|
Uncultured Type |
|
Commercial Strain |
|
Commercial Strain Comments |
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ORGANISM TAXONOMY
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|
NCBI Taxonomy ID |
208963 |
NCBI Superkingdom |
Bacteria
|
NCBI Kingdom |
|
NCBI Phylum |
Proteobacteria
|
NCBI Class |
Gammaproteobacteria
|
NCBI Order |
Pseudomonadales
|
NCBI Family |
Pseudomonadaceae
|
NCBI Genus |
Pseudomonas
|
NCBI Species |
Pseudomonas aeruginosa
|
ISOLATION CLASSIFICATION | |
Ecosystem |
Host-associated
|
Ecosystem Category |
Human
|
Ecosystem Type |
|
Ecosystem Subtype |
|
Specific Ecosystem |
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ORGANISM EXTERNAL REFERENCES | |
Strain Info ID |
|
Genbank 16S ID |
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GENERAL PROPERTIES | |
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Oxygen Requirement |
Aerobe
|
Cell Shape |
Rod-shaped
|
Motility |
Motile
|
Sporulation |
Nonsporulating
|
Temperature Range |
Mesophile
|
Temperature Optimum |
25 - 30
|
Salinity |
|
pH |
|
Cell Diameter |
|
Cell Length |
|
Color |
|
Gram Staining |
Gram-
|
Biotic Relationships | Free living |
Symbiotic Physical Interaction |
|
Symbiotic Relationship |
|
Symbiont Name |
|
Symbiont Taxon ID |
|
Cell Arrangements |
Singles |
Diseases |
Nocosomial infection Opportunistic infection |
Known Habitats |
Soil Host Fresh water Wastewater |
Metabolisms |
|
Phenotypes |
Pathogen |
Energy Sources |
Heterotroph |
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