PROJECT INFORMATION | |
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GOLD Project ID
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Gp0000278
|
Project Name
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Leuconostoc mesenteroides mesenteroides ATCC 8293
|
Other Names
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|
Legacy ER Project ID
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10242
|
Legacy GOLD ID
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Gi00330, Gc00444
|
NCBI BioProject Name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
NCBI BioProject Accession
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PRJNA315 |
NCBI Locus Tag
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LEUM
|
NCBI BioSample Accession
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SAMN02598482 |
PI | Steele, James |
Added By |
Nikos Kyrpides
on 2007-11-27 |
Last Modified By |
Jon Bertsch
on 2014-04-08 |
Project Comments |
|
Project Status
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Complete and Published
|
Project Relevance
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Food industry Fermentation Lactic acid production Biotechnological |
Sequencing Center
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Fidelity Systems Inc
(USA)
DOE Joint Genome Institute (JGI) (USA) |
Collaborating Institute
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North Carolina State University
(USA)
|
Funding Agency
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U.S. Department of Energy (DOE)
(USA)
|
Project Description
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Used in industrial food fermentations
|
Is JGI Project |
Yes
|
Project Information Visibility
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Public |
PROJECT TYPE | |
Specimen
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Organism |
Nucleic Acid
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DNA |
Sequencing Strategy
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Whole Genome Sequencing
|
EXTERNAL PROJECT LINKS | |
JGI Data Utilization Status
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|
JGI Award DOI
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|
JGI Portal Download | Raw Sequence Data |
Genome Publications
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Proceedings of the National Academy of Sciences of the United States of America
Comparative genomics of the lactic acid bacteria.
|
Other Publications
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|
Ignored Publications
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|
Unassigned Publications
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|
SRA Experiment |
|
PROJECT COMPOSITION | |
Study |
Lactic Acid Bacteria |
Organism |
Leuconostoc mesenteroides mesenteroides ATCC 8293 |
Analysis Projects |
Leuconostoc mesenteroides mesenteroides ATCC 8293 |
Number of Analysis Projects (AP) |
1 |
Number of Derived Analyis Projects (DAP) |
0
|
SEQUENCING INFORMATION | |
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Sequencing Status
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Complete |
Sequencing Quality (MIGS-31) |
Level 6: Finished |
Finishing Goal
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Level 6: Finished |
Contamination Screening Input
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|
DNA Amplification Method
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|
Single Cell Lysis Protocol
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|
Single Cell Lysis Approach
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|
Sequencing Comments
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|
DNA Amplification Kit
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|
Sequencing Technology
(MIGS-29)
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|
Library Method
(MIGS-28)
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|
Library Layout
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Library Screening Method
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|
Number Of Reads
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|
Read Size
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Vector
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|
GC Percent |
38
|
Chromosome Count |
1
|
Plasmid Count |
1
|
ORGANISM NAME | |
---|---|
GOLD Organism ID |
Go0000278 |
Organism Name |
Leuconostoc mesenteroides mesenteroides ATCC 8293
|
Other names (alias, synonyms, short names, common names) |
|
Organism Domain |
BACTERIAL
|
Phylogeny |
FIRMICUTES
|
Genus |
Leuconostoc
|
Genus Synonyms |
|
Species |
Leuconostoc mesenteroides
|
Subspecies |
mesenteroides
|
Species Synonyms |
|
Strain |
ATCC 8293
|
Strain Synonyms |
|
Serovar/Cultivar |
|
Culture Collection ID |
ATCC 8293
|
Type Strain |
Yes
|
Exemplar DOI |
10.1601/ex.5569
|
Exemplar Name |
Leuconostoc mesenteroides mesenteroides
|
Taxon DOI |
10.1601/tx.5569
|
Biosafety Level |
1
|
Organism Comments |
|
Cultured |
Yes
|
Culture Type |
Isolate
|
Organism Type |
Natural
|
Uncultured Type |
|
Commercial Strain |
|
Commercial Strain Comments |
|
ORGANISM TAXONOMY
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|
NCBI Taxonomy ID |
203120 |
NCBI Superkingdom |
Bacteria
|
NCBI Kingdom |
|
NCBI Phylum |
Firmicutes
|
NCBI Class |
Bacilli
|
NCBI Order |
Lactobacillales
|
NCBI Family |
Lactobacillaceae
|
NCBI Genus |
Leuconostoc
|
NCBI Species |
Leuconostoc mesenteroides
|
ISOLATION CLASSIFICATION | |
Ecosystem |
Engineered
|
Ecosystem Category |
Food production
|
Ecosystem Type |
Unclassified
|
Ecosystem Subtype |
Unclassified
|
Specific Ecosystem |
Unclassified
|
ORGANISM EXTERNAL REFERENCES | |
Strain Info ID |
505624 |
Genbank 16S ID |
X95978 |
GENERAL PROPERTIES | |
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Oxygen Requirement |
Facultative
|
Cell Shape |
Coccus-shaped
|
Motility |
Nonmotile
|
Sporulation |
|
Temperature Range |
Mesophile
|
Salinity |
|
pH |
|
Cell Diameter |
|
Cell Length |
|
Color |
|
Gram Staining |
Gram+
|
Biotic Relationships | Free living |
Symbiotic Physical Interaction |
|
Symbiotic Relationship |
|
Symbiont Name |
|
Symbiont Taxon ID |
|
Cell Arrangements |
Singles Pairs Chains |
Diseases |
None |
Known Habitats |
|
Metabolisms |
|
Phenotypes |
Vancomycin resistant |
Energy Sources |
|
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