PROJECT NAME
GOLD Project ID
Gp0000253  
Project Name
Francisella tularensis novicida U112  
Other Names
  
Legacy ER Project ID
10220  
Legacy GOLD ID
Gi01161, Gc00465  
NCBI BioProject Name Francisella novicida U112
NCBI BioProject ID 16088
NCBI BioProject Accession
PRJNA16088  
NCBI Locus Tag
FTN  
NCBI BioSample Accession
SAMN02604254  
PI Rohmer L
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Animal Pathogen
Biothreat
Human Pathogen
Medical
Sequencing Center
  
Collaborating Institute University of Washington (USA)
Funding Agency
  
Project Description
Type strain  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Wikipedia
Taxonomy
Database
  
Genome Publications Genome biology Comparison of Francisella tularensis genomes reveals evolutionary events associated with the emergence of human pathogenic strains.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Francisella tularensis novicida U112
Analysis Projects Francisella tularensis novicida U112
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
29180   
Read Size
  
Vector
  
GC Percent
32  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000253
Organism Name
Francisella tularensis novicida U112  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Francisella  
Genus Synonyms
  
Species
Francisella tularensis  
Subspecies
novicida  
Species Synonyms
  
Strain
U112  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.2309  
Exemplar Name
Francisella novicida  
Taxon DOI
10.1601/tx.2308  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 401614
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Thiotrichales  
NCBI Family
Francisellaceae  
NCBI Genus
Francisella  
NCBI Species
Francisella tularensis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases None
Known Habitats Fresh water
Host
Metabolisms
  
Phenotypes Non-Pathogen
Nonvirulent
Energy Sources
  

 

 

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