PROJECT NAME
GOLD Project ID
Gp0000241  
Project Name
Pyrobaculum islandicum DSM 4184  
Other Names
  
Legacy ER Project ID
10210  
Legacy GOLD ID
Gi01057, Gc00475  
NCBI BioProject Name Pyrobaculum islandicum DSM 4184
NCBI BioProject ID 16743
NCBI BioProject Accession
PRJNA16743  
NCBI Locus Tag
Pisl  
NCBI BioSample Accession
SAMN02598374  
PI Todd Lowe
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Hyperthermophilic anaerobe  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Entrez
Taxonomy
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Pyrobaculum genomes
Analysis Projects Pyrobaculum islandicum DSM 4184
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
50  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000241
Organism Name
Pyrobaculum islandicum DSM 4184  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
CRENARCHAEOTA-THERMOPROTEI  
Genus
Pyrobaculum  
Genus Synonyms
  
Species
Pyrobaculum islandicum  
Subspecies
  
Species Synonyms
  
Strain
DSM 4184  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 4184  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.13  
Exemplar Name
Pyrobaculum islandicum  
Taxon DOI
10.1601/tx.13  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 384616
NCBI Kingdom
  
NCBI Phylum
Crenarchaeota  
NCBI Class
Thermoprotei  
NCBI Order
Thermoproteales  
NCBI Family
Thermoproteaceae  
NCBI Genus
Pyrobaculum  
NCBI Species
Pyrobaculum islandicum  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Wastewater  
Ecosystem Type
Industrial wastewater  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 158684
Genbank 16S ID L07511
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Hyperthermophile  
Temperature Optimum
100  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Aquatic
Fresh water
Host
Metabolisms
  
Phenotypes Neutrophilic
Non-Pathogen
Energy Sources
  

 

 

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