PROJECT INFORMATION
GOLD Project ID
Gp0000235  
Project Name
Yersinia enterocolitica enterocolitica sv. 0:08 8081  
Other Names
  
Legacy ER Project ID
10204  
Legacy GOLD ID
Gi00703, Gc00481  
NCBI BioProject Name Yersinia enterocolitica subsp. enterocolitica 8081
NCBI BioProject ID 190
NCBI BioProject Accession PRJNA190
NCBI Locus Tag
YE  
NCBI BioSample Accession SAMEA1705958
PI
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jyothi Mallajosyula on 2014-10-10
Project Comments
  
Project Status
Complete and Published  
Project Relevance Human Pathogen
Medical
Sequencing Center Wellcome Trust Sanger Institute (United Kingdom)
Institut Pasteur (France)
Collaborating Institute ANRT (France)
Funding Agency Beowulf Genomics (United Kingdom)
Project Description
Food and waterborn pathogen that causes gastroenteritis  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Wikipedia
Database
  
Genome Publications PLoS genetics The complete genome sequence and comparative genome analysis of the high pathogenicity Yersinia enterocolitica strain 8081.
Other Publications
  
PROJECT COMPOSITION
Study Yersinia enterocolitica enterocolitica 8081
Analysis Projects Yersinia enterocolitica enterocolitica sv. 0:08 8081
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
47  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0000235
Organism Name
Yersinia enterocolitica enterocolitica sv. 0:08 8081  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Yersinia  
Genus Synonyms
  
Species
Yersinia enterocolitica  
Subspecies
enterocolitica  
Species Synonyms
  
Strain
8081  
Strain Synonyms
  
Serovar-Biovar
0:08  
Culture Collection ID
NCTC 13174  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 393305
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacterales  
NCBI Family
Yersiniaceae  
NCBI Genus
Yersinia  
NCBI Species
Yersinia enterocolitica  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 719455
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
28 - 30  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases Gastroenteritis
Food poisoning
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources Heterotroph
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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