PROJECT NAME
GOLD Project ID
Gp0000171  
Project Name
Pseudomonas stutzeri A1501  
Other Names
  
Legacy ER Project ID
10144  
Legacy GOLD ID
Gi01534, Gc00541  
NCBI BioProject Name Pseudomonas stutzeri A1501
NCBI BioProject ID 16817
NCBI BioProject Accession
PRJNA16817  
NCBI Locus Tag
PST  
NCBI BioSample Accession
SAMN02603910  
PI Claudine Elmerich
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Agricultural
Bioremediation
Environmental
Sequencing Center
  
Collaborating Institute Chinese Academy of Agricultural Sciences (China)
Funding Agency
  
Project Description
Nitrogen-fixing organism used in rice cultivation  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Wikipedia
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America 105(21):7564-9 Nitrogen fixation island and rhizosphere competence traits in the genome of root-associated Pseudomonas stutzeri A1501.
Other Publications
  
PROJECT COMPOSITION
Studies Pseudomonas stutzeri A1501
Analysis Projects Pseudomonas stutzeri A1501
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
2-4 kb, 4-6 kb  
Number Of Reads
50408  
Read Size
  
Vector
pUC19  
GC Percent
64  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000171
Organism Name
Pseudomonas stutzeri A1501  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Pseudomonas  
Genus Synonyms
  
Species
Pseudomonas stutzeri  
Subspecies
  
Species Synonyms
  
Strain
A1501  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
CGMCC 0351  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 379731
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Pseudomonadales  
NCBI Family
Pseudomonadaceae  
NCBI Genus
Pseudomonas  
NCBI Species
Pseudomonas stutzeri  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Rhizoplane  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases None
Known Habitats Host
Rice roots
Soil
Metabolisms Denitrifying
Phenotypes Non-Pathogen
Energy Sources Heterotroph

 

 

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