PROJECT NAME
GOLD Project ID
Gp0000161  
Project Name
Flavobacterium johnsoniae UW101, ATCC 17061  
Other Names
  
Legacy ER Project ID
10135  
Legacy GOLD ID
Gi00942, Gc00550  
NCBI BioProject Name Flavobacterium johnsoniae UW101
NCBI BioProject ID 16082
NCBI BioProject Accession
PRJNA16082  
NCBI Locus Tag
Fjoh  
NCBI BioSample Accession
SAMN02598357  
PI Mark McBride
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biomass conversion
Biotechnological
Fish Pathogen
Medical
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Common soil and freshwater bacterium that is motile by gliding  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications Applied and environmental microbiology 75(21):6864-75 Novel features of the polysaccharide-digesting gliding bacterium Flavobacterium johnsoniae as revealed by genome sequence analysis.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Flavobacterium johnsoniae
Analysis Projects Flavobacterium johnsoniae UW101, ATCC 17061
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
34  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000161
Organism Name
Flavobacterium johnsoniae UW101, ATCC 17061  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Flavobacterium  
Genus Synonyms
  
Species
Flavobacterium johnsoniae  
Subspecies
  
Species Synonyms
  
Strain
UW101, ATCC 17061  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 17061  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.8282  
Exemplar Name
Flavobacterium johnsoniae  
Taxon DOI
10.1601/tx.8097  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 376686
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Flavobacteriia  
NCBI Order
Flavobacteriales  
NCBI Family
Flavobacteriaceae  
NCBI Genus
Flavobacterium  
NCBI Species
Flavobacterium johnsoniae  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 8766
Genbank 16S ID AM230489
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
20 - 30  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Skin lesions
Known Habitats Fresh water
Soil
Metabolisms Chitin degradation
Phenotypes
  
Energy Sources
  

 

 

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