PROJECT NAME
GOLD Project ID
Gp0000126  
Project Name
Thermosipho melanesiensis BI429  
Other Names
  
Legacy ER Project ID
10103  
Legacy GOLD ID
Gi01045, Gc00582  
NCBI BioProject Name Thermosipho melanesiensis BI429
NCBI BioProject ID 17249
NCBI BioProject Accession
PRJNA17249  
NCBI Locus Tag
Tmel  
NCBI BioSample Accession
SAMN00623068  
PI Noll, Kenneth M.
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Evolution
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Thermophilic organism isolated from the gills of a hydrothermal vent mussel  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Isolation
Information
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America 106(14):5865-70 On the chimeric nature, thermophilic origin, and phylogenetic placement of the Thermotogales.
Other Publications
  
PROJECT COMPOSITION
Studies Thermotogales
Analysis Projects Thermosipho melanesiensis BI429
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
31  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000126
Organism Name
Thermosipho melanesiensis BI429  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
THERMOTOGAE  
Genus
Thermosipho  
Genus Synonyms
  
Species
Thermosipho melanesiensis  
Subspecies
  
Species Synonyms
  
Strain
BI429  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
CIP 104789  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.490  
Exemplar Name
Thermosipho melanesiensis  
Taxon DOI
10.1601/tx.490  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 391009
NCBI Kingdom
  
NCBI Phylum
Thermotogae  
NCBI Class
Thermotogae  
NCBI Order
Thermotogales  
NCBI Family
Fervidobacteriaceae  
NCBI Genus
Thermosipho  
NCBI Species
Thermosipho melanesiensis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mollusca  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 162999
Genbank 16S ID Z70248
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
  
Temperature Range
Thermophile  
Temperature Optimum
70  
Salinity
  
pH
6.5  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Chains
Pairs
Singles
Diseases None
Known Habitats Aquatic
Host
Hot spring
Hydrothermal vent
Marine
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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