PROJECT NAME
GOLD Project ID
Gp0000125  
Project Name
Parabacteroides distasonis ATCC 8503  
Other Names
  
Legacy ER Project ID
10102  
Legacy GOLD ID
Gi00067, Gc00583  
NCBI BioProject Name Parabacteroides distasonis ATCC 8503
NCBI BioProject ID 13485
NCBI BioProject Accession PRJNA13485
NCBI Locus Tag
BDI  
NCBI BioSample Accession SAMN02604310
PI Human Gut Community Users
Added By Nikos Kyrpides on 2007-11-27
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Human Gut Microbiome Initiative (HGMI)
Animal Pathogen
Human Pathogen
Medical
Sequencing Center Washington University in St. Louis (USA)
Collaborating Institute
  
Funding Agency National Science Foundation (NSF) (USA)
Project Description
Dominant member of mammalian intestinal microflora  
Project Information Visibility Public
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Database
  
Genome Publications PLoS biology Evolution of symbiotic bacteria in the distal human intestine.
Other Publications
  
PROJECT COMPOSITION
Study Parabacteroides distasonis ATCC 8503
Analysis Projects Parabacteroides distasonis ATCC 8503
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
454
Library Method (MIGS-28)
5 kb, 40 kb  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
45  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000125
Organism Name
Parabacteroides distasonis ATCC 8503  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Parabacteroides  
Genus Synonyms
  
Species
Parabacteroides distasonis  
Subspecies
  
Species Synonyms
  
Strain
ATCC 8503  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 8503  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.7947  
Exemplar Name
Parabacteroides distasonis  
Taxon DOI
10.1601/tx.9776  
Biosafety Level
2  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 435591
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Bacteroidia  
NCBI Order
Bacteroidales  
NCBI Family
Tannerellaceae  
NCBI Genus
Parabacteroides  
NCBI Species
Parabacteroides distasonis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 94765
Genbank 16S ID AB238922
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Opportunistic peritoneal disease
Known Habitats Intestinal tract
Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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