PROJECT NAME
GOLD Project ID
Gp0000120  
Project Name
Methanococcus vannielii SB  
Other Names
  
Legacy ER Project ID
10097  
Legacy GOLD ID
Gi01309, Gc00588  
NCBI BioProject Name Methanococcus vannielii SB
NCBI BioProject ID 17889
NCBI BioProject Accession
PRJNA17889  
NCBI Locus Tag
Mevan  
NCBI BioSample Accession
SAMN02598403  
PI William Whitman
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Carbon cycle
Comparative analysis
Energy production
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
A methane-producing motile coccus  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Entrez
Taxonomy
Wikipedia
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies 5 mesophilic methanococci Proposal # 0179-051115
Analysis Projects Methanococcus vannielii SB
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
31  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000120
Organism Name
Methanococcus vannielii SB  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-METHANOCOCCI  
Genus
Methanococcus  
Genus Synonyms
  
Species
Methanococcus vannielii  
Subspecies
  
Species Synonyms
  
Strain
SB  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 1224  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.147  
Exemplar Name
Methanococcus vannielii  
Taxon DOI
10.1601/tx.147  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 406327
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Methanococci  
NCBI Order
Methanococcales  
NCBI Family
Methanococcaceae  
NCBI Genus
Methanococcus  
NCBI Species
Methanococcus vannielii  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Intertidal zone  
Specific Ecosystem
Estuary  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 267924
Genbank 16S ID NR_025718
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Coccus-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
20 - 40  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases None
Known Habitats Marine
Mud
Metabolisms Methanogen
Phenotypes Non-Pathogen
Energy Sources Lithotroph

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?