PROJECT NAME
GOLD Project ID
Gp0000090  
Project Name
Ochrobactrum anthropi ATCC 49188  
Other Names
  
Legacy ER Project ID
10069  
Legacy GOLD ID
Gi01920, Gc00616  
NCBI BioProject Name Ochrobactrum anthropi ATCC 49188
NCBI BioProject ID 19485
NCBI BioProject Accession
PRJNA19485  
NCBI Locus Tag
Oant  
NCBI BioSample Accession
SAMN02598421  
PI Chain, Patrick G
Added By Nikos Kyrpides on 2007-11-27 00:00:00.0
Last Modified By Jon Bertsch on 2014-04-08 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Comparative analysis
Human Pathogen
Medical
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Lawrence Livermore National Laboratory (USA)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Soil bacterium that can cause opportunistic infections  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Entrez
Taxonomy
Database
  
Genome Publications Journal of bacteriology 193(16):4274-5 Genome of Ochrobactrum anthropi ATCC 49188 T, a versatile opportunistic pathogen and symbiont of several eukaryotic hosts.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies WFO-LLNL proposal
Analysis Projects Ochrobactrum anthropi ATCC 49188
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
56  
Chromosome Count
2  
Plasmid Count
4  
ORGANISM NAME
GOLD Organism ID Go0000090
Organism Name
Ochrobactrum anthropi ATCC 49188  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Ochrobactrum  
Genus Synonyms
  
Species
Ochrobactrum anthropi  
Subspecies
  
Species Synonyms
  
Strain
ATCC 49188  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 49188  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.1393  
Exemplar Name
Ochrobactrum anthropi  
Taxon DOI
10.1601/tx.1393  
Biosafety Level
2  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 439375
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhizobiales  
NCBI Family
Brucellaceae  
NCBI Genus
Ochrobactrum  
NCBI Species
Ochrobactrum anthropi  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Industrial production  
Ecosystem Type
Engineered product  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 389567
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Meningitis
Opportunistic infection
Known Habitats Host
Sludge
Soil
Terrestrial
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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