PROJECT NAME
GOLD Project ID
Gp0000072  
Project Name
Fervidobacterium nodosum Rt17-B1  
Other Names
  
Legacy ER Project ID
10055  
Legacy GOLD ID
Gi01012, Gc00630  
NCBI BioProject Name Fervidobacterium nodosum Rt17-B1
NCBI BioProject ID 16719
NCBI BioProject Accession
PRJNA16719  
NCBI Locus Tag
Fnod  
NCBI BioSample Accession
SAMN00623043  
PI Noll, Kenneth M.
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Evolution
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Hyperthermophilic hot spring bacterium  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America 106(14):5865-70 On the chimeric nature, thermophilic origin, and phylogenetic placement of the Thermotogales.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Thermotogales
Analysis Projects Fervidobacterium nodosum Rt17-B1
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
35  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000072
Organism Name
Fervidobacterium nodosum Rt17-B1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
THERMOTOGAE  
Genus
Fervidobacterium  
Genus Synonyms
  
Species
Fervidobacterium nodosum  
Subspecies
  
Species Synonyms
  
Strain
Rt17-B1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 35602  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.472  
Exemplar Name
Fervidobacterium nodosum  
Taxon DOI
10.1601/tx.472  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 381764
NCBI Kingdom
  
NCBI Phylum
Thermotogae  
NCBI Class
Thermotogae  
NCBI Order
Thermotogales  
NCBI Family
Fervidobacteriaceae  
NCBI Genus
Fervidobacterium  
NCBI Species
Fervidobacterium nodosum  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Thermal springs  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 110964
Genbank 16S ID M59177
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Thermophile  
Temperature Optimum
70  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Chains
Pairs
Singles
Diseases None
Known Habitats Aquatic
Fresh water
Hot spring
Metabolisms
  
Phenotypes
  
Energy Sources Chemoorganotroph

 

 

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