PROJECT NAME
GOLD Project ID
Gp0000070  
Project Name
Xanthobacter autotrophicus Py2  
Other Names
  
Legacy ER Project ID
10053  
Legacy GOLD ID
Gi00972, Gc00632  
NCBI BioProject Name Xanthobacter autotrophicus Py2
NCBI BioProject ID 15756
NCBI BioProject Accession
PRJNA15756  
NCBI Locus Tag
Xaut  
NCBI BioSample Accession
SAMN02598342  
PI Ensign, Scott
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-05-20
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Bioremediation
Environmental
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Alkene-degrading bacterium  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Entrez
Taxonomy
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Xanthobacter autotrophicus strain Py2
Analysis Projects Xanthobacter autotrophicus Py2
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
67  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0000070
Organism Name
Xanthobacter autotrophicus Py2  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Xanthobacter  
Genus Synonyms
  
Species
Xanthobacter autotrophicus  
Subspecies
  
Species Synonyms
  
Strain
Py2  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC BAA-1158  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.1574  
Exemplar Name
Xanthobacter autotrophicus  
Taxon DOI
10.1601/tx.1574  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 78245
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhizobiales  
NCBI Family
Xanthobacteraceae  
NCBI Genus
Xanthobacter  
NCBI Species
Xanthobacter autotrophicus  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 692491
Genbank 16S ID X94201
Synonym List
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Aquatic
Fresh water
Sediment
Soil
Metabolisms Nitrogen fixation
Phenotypes
  
Energy Sources Methylotroph

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?