PROJECT NAME
GOLD Project ID
Gp0000066  
Project Name
Ignicoccus hospitalis KIN4/I, DSM 18386  
Other Names
  
Legacy ER Project ID
10049  
Legacy GOLD ID
Gi01875, Gc00636  
NCBI BioProject Name Ignicoccus hospitalis KIN4/I
NCBI BioProject ID 13914
NCBI BioProject Accession
PRJNA13914  
NCBI Locus Tag
Igni  
NCBI BioSample Accession
SAMN02598324  
PI Mircea Podar
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Isolated from gravel from the Kolbeinsey Ridge  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Taxonomy
Isolation
Entrez
Database
  
Genome Publications Genome biology 9(11):R158 A genomic analysis of the archaeal system Ignicoccus hospitalis-Nanoarchaeum equitans.
Other Publications
  
PROJECT COMPOSITION
Studies Ignicoccus hospitalis KIN4/I
Analysis Projects Ignicoccus hospitalis KIN4/I, DSM 18386
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
3Kb, 6Kb, 40Kb  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
57  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000066
Organism Name
Ignicoccus hospitalis KIN4/I, DSM 18386  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
CRENARCHAEOTA-THERMOPROTEI  
Genus
Ignicoccus  
Genus Synonyms
  
Species
Ignicoccus hospitalis  
Subspecies
  
Species Synonyms
  
Strain
KIN4/I, DSM 18386  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 18386  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.10785  
Exemplar Name
Ignicoccus hospitalis  
Taxon DOI
10.1601/tx.10785  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 453591
NCBI Kingdom
  
NCBI Phylum
Crenarchaeota  
NCBI Class
Thermoprotei  
NCBI Order
Desulfurococcales  
NCBI Family
Desulfurococcaceae  
NCBI Genus
Ignicoccus  
NCBI Species
Ignicoccus hospitalis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Hydrothermal vents  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 701767
Genbank 16S ID AJ318042
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Coccus-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Hyperthermophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 1
Term Symbiotic
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
Nanoarchaeum equitans  
Symbiont Taxon ID
  
Cell Arrangements Pairs
Singles
Diseases None
Known Habitats Aquatic
Hot spring
Hydrothermal vent
Marine
Metabolisms
  
Phenotypes
  
Energy Sources Chemolithoautotroph

 

 

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