PROJECT NAME
GOLD Project ID
Gp0000033  
Project Name
Acaryochloris marina MBIC11017  
Other Names
  
Legacy ER Project ID
10018  
Legacy GOLD ID
Gi00728, Gc00667  
NCBI BioProject Name Acaryochloris marina MBIC11017
NCBI BioProject ID 12997
NCBI BioProject Accession
PRJNA12997  
NCBI Locus Tag
AM1  
NCBI BioSample Accession
SAMN02604308  
PI Blankenship RE
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center Washington University in St. Louis (USA)
Collaborating Institute TGen (USA)
Arizona State University (USA)
Funding Agency National Science Foundation (NSF) (USA)
Project Description
A photosynthetic organism with a unique low ratio of chlorophyll a to chlorophyll d  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Biology
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America 105(6):2005-10 Niche adaptation and genome expansion in the chlorophyll d-producing cyanobacterium Acaryochloris marina.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Acaryochloris marina MBIC11017
Analysis Projects Acaryochloris marina MBIC11017
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS20
Sanger
Library Method (MIGS-28)
2-3 kb, 6-8 kb, 28-47 kb  
Number Of Reads
1860686  
Read Size
  
Vector
pOTWI3, pEpiFOS-5  
GC Percent
47  
Chromosome Count
1  
Plasmid Count
9  
ORGANISM NAME
GOLD Organism ID Go0000033
Organism Name
Acaryochloris marina MBIC11017  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
CYANOBACTERIA  
Genus
Acaryochloris  
Genus Synonyms
  
Species
Acaryochloris marina  
Subspecies
  
Species Synonyms
  
Strain
MBIC11017  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
NBRC 102967  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 329726
NCBI Kingdom
  
NCBI Phylum
Cyanobacteria  
NCBI Class
  
NCBI Order
Chroococcales  
NCBI Family
  
NCBI Genus
Acaryochloris  
NCBI Species
Acaryochloris marina  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Animal  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 373281
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Sphere-shaped  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 1
Term Symbiotic
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
Lissoclinum patella  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases None
Known Habitats Marine
Metabolisms
  
Phenotypes Non-Pathogen
Symbiont
Energy Sources Photosynthetic

 

 

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