PROJECT INFORMATION
GOLD Project ID
Gp0097570  
Project Name
Thermus filiformis ATCC 43280  
Other Names
  
Legacy ER Project ID
75243  
Legacy GOLD ID
Gi0075243  
NCBI BioProject Name Thermus filiformis strain:ATCC 43280
NCBI BioProject ID 253908
NCBI BioProject Accession PRJNA253908
NCBI Locus Tag
THFILI  
NCBI BioSample Accession SAMN02898028
PI
Added By JGI automated process on 2014-07-08
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Industrial
Sequencing Center National Center for Research in Energy and Materials (CNPEM)
Collaborating Institute
  
Funding Agency
  
Project Description
Genome sequencing of Thermus filiformis ATT43280  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Genome announcements Draft Genome Sequence of the Thermophile Thermus filiformis ATCC 43280, Producer of Carotenoid-(Di)glucoside-Branched Fatty Acid (Di)esters and Source of Hyperthermostable Enzymes of Biotechnological Interest.

Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX641263
Experiment Title Genome sequencing of Thermus filiformis ATT43280
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name TFILLIS-2_S1
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
Spot Length 500
PROJECT COMPOSITION
Study Thermus filiformis ATT43280 Genome sequencing
Organism Thermus filiformis ATCC 43280
Analysis Projects Thermus filiformis ATCC 43280
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0097570
Organism Name
Thermus filiformis ATCC 43280  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
DEINOCOCCUS-THERMUS  
Genus
Thermus  
Genus Synonyms
  
Species
Thermus filiformis  
Subspecies
  
Species Synonyms
  
Strain
ATCC 43280  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
ATCC 43280  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.524  
Exemplar Name
Thermus filiformis  
Taxon DOI
10.1601/tx.524  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 276
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Deinococcus-Thermus  
NCBI Class
Deinococci  
NCBI Order
Thermales  
NCBI Family
Thermaceae  
NCBI Genus
Thermus  
NCBI Species
Thermus filiformis  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Thermophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
70C  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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