PROJECT INFORMATION
GOLD Project ID
Gp0096078  
Project Name
Marinobacter similis JCM 19398  
Other Names
  
Legacy ER Project ID
74715  
Legacy GOLD ID
Gi0074715  
NCBI BioProject Name Marinobacter similis strain:JCM19398
NCBI BioProject ID 252070
NCBI BioProject Accession PRJDB1700
NCBI Locus Tag
JCM19398  
NCBI BioSample Accession
PI
Added By JGI automated process on 2014-06-23
Last Modified By Galina Ovchinnikova on 2017-04-14
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center University of Tokyo (Japan)
Collaborating Institute
  
Funding Agency
  
Project Description
For the promotion of various studies, we perform genome sequencing of the important 300 microbial organisms to human and the environment.  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Genome sequencing of Marinobacter similes JCM19398
Organism Marinobacter similis JCM 19398
Analysis Projects
  
Number of Analysis Projects 0
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0096078
Organism Name
Marinobacter similis JCM 19398  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Marinobacter  
Genus Synonyms
  
Species
Marinobacter similis  
Subspecies
  
Species Synonyms
  
Strain
JCM19398  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
JCM19398  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.26113  
Exemplar Name
Marinobacter similis  
Taxon DOI
10.1601/tx.26113  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1420916
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Alteromonadales  
NCBI Family
Alteromonadaceae  
NCBI Genus
Marinobacter  
NCBI Species
Marinobacter similis  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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