PROJECT INFORMATION
GOLD Project ID
Gp0071515  
Project Name
Vibrio cholerae O1 bv. El Tor Ogawa RND6878  
Other Names
  
Legacy ER Project ID
63116  
Legacy GOLD ID
Gi0063116  
NCBI BioProject Name Vibrio cholerae O1 biovar El Tor str. Ogawa RND6878
NCBI BioProject ID 226194
NCBI BioProject Accession PRJNA226194
NCBI Locus Tag
U853  
NCBI BioSample Accession SAMN02469783
PI
Added By JGI automated process on 2013-12-04
Last Modified By JGI automated process on 2014-10-31
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Medical
Sequencing Center Central Research Institute for Epidemiology (Russia)
Collaborating Institute
  
Funding Agency
  
Project Description
This sequencing project of Vibrio cholerae strain was implemented with the collaboration between Federal Budget Institute of Science Central Research Institute for Epidemiology (111123, Russia, Moscow, Novogireevskaya St., 3A) and Federal Government Health Institution Rostov-on-Don Plague Control Research Institute (344002, Russia, Rostov-on-Don, Maxim Gorky St., 117).  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Vibrio cholerae O1 biovar El Tor Ogawa RND6878
Organism Vibrio cholerae O1 bv. El Tor Ogawa RND6878
Analysis Projects Vibrio cholerae O1 bv. El Tor Ogawa RND6878
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
47  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0071515
Organism Name
Vibrio cholerae O1 bv. El Tor Ogawa RND6878  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Vibrio  
Genus Synonyms
  
Species
Vibrio cholerae  
Subspecies
  
Species Synonyms
  
Strain
Ogawa RND6878  
Strain Synonyms
  
Serovar-Biovar
El Tor  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1416746
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Vibrionales  
NCBI Family
Vibrionaceae  
NCBI Genus
Vibrio  
NCBI Species
Vibrio cholerae  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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