PROJECT INFORMATION
GOLD Project ID
Gp0006611  
Project Name
Vibrio cholerae sv. O1 Amazonia/FG1066  
Other Names
  
Legacy ER Project ID
16424  
Legacy GOLD ID
Gi05869  
NCBI BioProject Name Vibrio cholerae Amazonia/FG1066
NCBI BioProject ID 43095
NCBI BioProject Accession PRJEA43095
NCBI Locus Tag
AMFG  
NCBI BioSample Accession
PI
Added By Nikos Kyrpides on 2010-01-13
Last Modified By Ionna Pagani on 2010-10-28
Project Comments
  
Project Status
incomplete  
Project Relevance Human Pathogen
Medical
Sequencing Center Federal University of Rio de Janeiro (Brazil)
Collaborating Institute
  
Funding Agency
  
Project Description
O1, non-toxigenic, pathogenic strain which caused a local outbreak of cholera disease  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Vibrio cholerae Amazonia/FG1066
Organism Vibrio cholerae sv. O1 Amazonia/FG1066
Analysis Projects
  
Number of Analysis Projects 0
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0006611
Organism Name
Vibrio cholerae sv. O1 Amazonia/FG1066  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Vibrio  
Genus Synonyms
  
Species
Vibrio cholerae  
Subspecies
  
Species Synonyms
  
Strain
Amazonia/FG1066  
Strain Synonyms
  
Serovar/Cultivar
O1  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 707239
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Vibrionales  
NCBI Family
Vibrionaceae  
NCBI Genus
Vibrio  
NCBI Species
Vibrio cholerae  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases Food poisoning
Cholera
Known Habitats Host
Fresh water
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph

 

 

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