PROJECT INFORMATION
GOLD Project ID
Gp0006138  
Project Name
Phaeobacter gallaeciensis DSM 17395  
Other Names
  
Legacy ER Project ID
11195  
Legacy GOLD ID
Gi01686, Gc02272  
NCBI BioProject Name Phaeobacter inhibens DSM 17395
NCBI BioProject ID 19355
NCBI BioProject Accession PRJNA19355
NCBI Locus Tag
PGA1  
NCBI BioSample Accession
PI Brinkhoff T
Added By Nikos Kyrpides on 2007-11-27
Last Modified By JGI automated process on 2014-05-20
Project Comments
  
Project Status
Complete and Published  
Project Relevance Marine Microbial Initiative (MMI)
Environmental
Biotechnological
Sequencing Center J. Craig Venter Institute (JCVI) (USA)
Collaborating Institute
  
Funding Agency Gordon and Betty Moore Foundation Marine Microbiology Initiative (USA)
Project Description
This marine strain is antagonistic to Vibrio species on agar plates. The inhibitory effect is due to the production of an antibacterial substance, which was demonstrated to enhance the survival of scallop larvae  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Moore Foundation
Database
  
Genome Publications The ISME journal 6(12):2229-44 Phaeobacter gallaeciensis genomes from globally opposite locations reveal high similarity of adaptation to surface life.
Other Publications
  
PROJECT COMPOSITION
Study Phaeobacter gallaeciensis DSM 17395
Organism Phaeobacter gallaeciensis DSM 17395
Analysis Projects Phaeobacter gallaeciensis DSM 17395
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
60  
Chromosome Count
1  
Plasmid Count
3  
ORGANISM NAME
GOLD Organism ID Go0006138
Organism Name
Phaeobacter gallaeciensis DSM 17395  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Phaeobacter  
Genus Synonyms
Roseobacter  
Species
Phaeobacter gallaeciensis  
Subspecies
  
Species Synonyms
  
Strain
DSM 17395  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 17395  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.1138  
Exemplar Name
Phaeobacter gallaeciensis  
Taxon DOI
10.1601/tx.9798  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 391619
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodobacterales  
NCBI Family
Rhodobacteraceae  
NCBI Genus
Phaeobacter  
NCBI Species
Phaeobacter inhibens  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mollusca  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID Y13244
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
Halophile  
pH
  
Cell Diameter
  
Cell Length
  
Color
Blue-green  
Gram Staining
Gram-  
Biotic Relationships Symbiotic
Symbiotic Physical Interaction
Endosymbiotic extracellular  
Symbiotic Relationship
Commensal  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Marine
Aquatic
Metabolisms
  
Phenotypes
  
Energy Sources Phototroph
Photosynthetic

 

 

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