PROJECT INFORMATION
GOLD Project ID
Gp0042597  
Project Name
Enterococcus faecium 670  
Other Names
  
Legacy ER Project ID
49298  
Legacy GOLD ID
Gi0049298  
NCBI BioProject Name Enterococcus faecium 670
NCBI BioProject ID 205841
NCBI BioProject Accession PRJNA205841
NCBI Locus Tag
HMPREF2100  
NCBI BioSample Accession
PI Fulton L
Added By Ionna Pagani on 2013-05-28
Last Modified By Ionna Pagani on 2013-05-29
Project Comments
  
Project Status
incomplete  
Project Relevance Human Microbiome Project (HMP)
Medical
Sequencing Center Washington University (USA)
Collaborating Institute
  
Funding Agency NIH (USA)
Project Description
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid
  
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information HMP
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Human Microbiome Project (HMP) Reference Genomes
Organism Enterococcus faecium 670
Analysis Projects
  
Number of Analysis Projects 0
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0042597
Organism Name
Enterococcus faecium 670  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Enterococcus  
Genus Synonyms
  
Species
Enterococcus faecium  
Subspecies
  
Species Synonyms
  
Strain
670  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1338522
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Enterococcaceae  
NCBI Genus
Enterococcus  
NCBI Species
Enterococcus faecium  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Animal  
Ecosystem Type
Circulatory system  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  
HMP METADATA
HMP ID
2100  
Show in DACC?
Yes  
HMP Project Status
In Progress  
BEI Status
  
NCBI Submission Status
2. project has NCBI project id  
Isolate Suggestion Source
  
HMP Isolation Body Sample Site
Blood  
HMP Isolation Body Sample Subsite
  
HMP Finishing Goal
  
Source, Sample & Medical Relevance Comments
  
Isolate Availability Comments
Stanford/Cesar Arias  
Project Comments
  
DNA Received
Yes  
Date DNA Received
2013-05-09  
Date Sequencing Begins
  
Date Draft Sequencing Completed
  
Cross Reference ID
  

 

 

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