PROJECT INFORMATION
GOLD Project ID
Gp0037573  
Project Name
Dickeya zeae DZ2Q  
Other Names
  
Legacy ER Project ID
43129  
Legacy GOLD ID
Gi0043129  
NCBI BioProject Name Dickeya zeae DZ2Q
NCBI BioProject ID 193475
NCBI BioProject Accession PRJNA193475
NCBI Locus Tag
J134  
NCBI BioSample Accession SAMN02469908
PI
Added By JGI automated process on 2013-04-02
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Agricultural
Sequencing Center International Centre for Genetic Engineering and Biotechnology (ICGEB) (International)
Collaborating Institute
  
Funding Agency
  
Project Description
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Genome announcements Draft Genome Sequence of the Plant Pathogen Dickeya zeae DZ2Q, Isolated from Rice in Italy.
Other Publications
  
PROJECT COMPOSITION
Study Draft Genome Sequencing of Dickeya zeae DZ2Q, a strain isolated from italian rice
Organism Dickeya zeae DZ2Q
Analysis Projects Dickeya zeae DZ2Q
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina GAIIx
454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
53  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0037573
Organism Name
Dickeya zeae DZ2Q  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Dickeya  
Genus Synonyms
  
Species
Dickeya zeae  
Subspecies
  
Species Synonyms
  
Strain
DZ2Q  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1306951
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacterales  
NCBI Family
Pectobacteriaceae  
NCBI Genus
Dickeya  
NCBI Species
Dickeya zeae  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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