PROJECT INFORMATION
GOLD Project ID
Gp0036963  
Project Name
Natronorubrum sulfidifaciens JCM 14089  
Other Names
  
Legacy ER Project ID
42908  
Legacy GOLD ID
Gi0042908  
NCBI BioProject Name Natronorubrum sulfidifaciens JCM 14089
NCBI BioProject ID 174944
NCBI BioProject Accession PRJNA174944
NCBI Locus Tag
C495  
NCBI BioSample Accession SAMN02471621
PI
Added By JGI automated process on 2013-04-02
Last Modified By JGI automated process on 2014-05-20
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center University of California, Davis (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Haloarchaeal genomes
Organism Natronorubrum sulfidifaciens JCM 14089
Analysis Projects Natronorubrum sulfidifaciens JCM 14089
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina GAIIx
Illumina HiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
62  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0036963
Organism Name
Natronorubrum sulfidifaciens JCM 14089  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-HALOBACTERIA  
Genus
Natronorubrum  
Genus Synonyms
  
Species
Natronorubrum sulfidifaciens  
Subspecies
  
Species Synonyms
  
Strain
JCM 14089  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
JCM 14089  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.10891  
Exemplar Name
Natronorubrum sulfidifaciens  
Taxon DOI
10.1601/tx.10891  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1230460
NCBI Superkingdom
Archaea  
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Halobacteria  
NCBI Order
Natrialbales  
NCBI Family
Natrialbaceae  
NCBI Genus
Natronorubrum  
NCBI Species
Natronorubrum sulfidifaciens  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Non-marine Saline and Alkaline  
Ecosystem Subtype
Hypersaline  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID DQ535889
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Pleomorphic-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
44 - 47  
Salinity
Halophile  
pH
8.7 - 9.2  
Cell Diameter
  
Cell Length
  
Color
Red  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Clusters
Diseases None
Known Habitats Aquatic
Fresh water
Metabolisms
  
Phenotypes
  
Energy Sources Chemoorganotroph

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?