PROJECT INFORMATION
GOLD Project ID
Gp0035948  
Project Name
Rhodopirellula maiorica SM1  
Other Names
  
Legacy ER Project ID
41165  
Legacy GOLD ID
Gi39362  
NCBI BioProject Name Rhodopirellula maiorica SM1
NCBI BioProject ID 182719
NCBI BioProject Accession PRJNA182719
NCBI Locus Tag
RMSM  
NCBI BioSample Accession SAMN02261082
PI
Added By JGI automated process on 2013-02-26
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Microbial Interactions in MArine Systems (MIMAS) (Germany)
Collaborating Institute
  
Funding Agency
  
Project Description
This strain was isolated from sediment near Pt Andratx, Mallorca, Spain, and will be used for comparative genome analysis.  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications 23273849
Other Publications
  
PROJECT COMPOSITION
Study Rhodopirellula genome sequencing - Max Planck Institute for Marine Microbiology
Organism Rhodopirellula maiorica SM1
Analysis Projects Rhodopirellula maiorica SM1
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
55  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0035948
Organism Name
Rhodopirellula maiorica SM1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PLANCTOMYCETES  
Genus
Rhodopirellula  
Genus Synonyms
  
Species
Rhodopirellula maiorica  
Subspecies
  
Species Synonyms
  
Strain
SM1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1265738
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Planctomycetes  
NCBI Class
Planctomycetia  
NCBI Order
Planctomycetales  
NCBI Family
Planctomycetaceae  
NCBI Genus
Rhodopirellula  
NCBI Species
Rhodopirellula maiorica  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Sediment  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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