PROJECT INFORMATION
GOLD Project ID
Gp0035298  
Project Name
Hyphomonas oceanitis SCH89  
Other Names
  
Legacy ER Project ID
40212  
Legacy GOLD ID
Gi23771  
NCBI BioProject Name Hyphomonas oceanitis SCH89
NCBI BioProject ID 186170
NCBI BioProject Accession PRJNA186170
NCBI Locus Tag
HOC  
NCBI BioSample Accession SAMN02746695
PI
Added By JGI automated process on 2013-01-22
Last Modified By JGI automated process on 2014-10-31
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Third Institute of Oceanography, State Oceanic Administration (China)
Collaborating Institute
  
Funding Agency
  
Project Description
Hyphomonas oceanitis SCH89 Genome Sequencing.  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Hyphomonas genome sequencing - The Third Institute of State Oceanic Administration (SOA), China
Organism Hyphomonas oceanitis SCH89
Analysis Projects Hyphomonas oceanitis SCH89
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina GAIIx
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
60  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0035298
Organism Name
Hyphomonas oceanitis SCH89  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Hyphomonas  
Genus Synonyms
  
Species
Hyphomonas oceanitis  
Subspecies
  
Species Synonyms
  
Strain
SCH89  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
ATCC 33879  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.1069  
Exemplar Name
Hyphomonas oceanitis  
Taxon DOI
10.1601/tx.1069  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1280953
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodobacterales  
NCBI Family
Hyphomonadaceae  
NCBI Genus
Hyphomonas  
NCBI Species
Hyphomonas oceanitis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Marine
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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