PROJECT INFORMATION
GOLD Project ID
Gp0033428  
Project Name
Collinsella massiliensis GD3  
Other Names
  
Legacy ER Project ID
38548  
Legacy GOLD ID
Gi21797  
NCBI BioProject Name Collinsella massiliensis
NCBI BioProject ID 177105
NCBI BioProject Accession PRJEB541
NCBI Locus Tag
BN421  
NCBI BioSample Accession SAMEA2272214
PI Pierre-Edouard Fournier
Added By JGI automated process on 2012-11-08
Last Modified By Nikos Kyrpides on 2015-05-13
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center European Bioinformatics Institute (United Kingdom)
Collaborating Institute
  
Funding Agency
  
Project Description
Genome sequence of Collinsella massiliensis  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Standards in genomic sciences 9(3):1144-58 Non-contiguous finished genome sequence and description of Collinsella massiliensis sp. nov.
Other Publications
  
PROJECT COMPOSITION
Study Culturomics: study of the human digestive flora
Analysis Projects Collinsella massiliensis GD3
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
66  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0033428
Organism Name
Collinsella massiliensis GD3  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Collinsella  
Genus Synonyms
  
Species
Collinsella sp. GD3  
Subspecies
  
Species Synonyms
  
Strain
GD3  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 26110  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.25955  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1232426
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Coriobacteriia  
NCBI Order
Coriobacteriales  
NCBI Family
Coriobacteriaceae  
NCBI Genus
Enorma  
NCBI Species
[Collinsella] massiliensis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Intestine  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
  
Motility
Non-motile  
Sporulation
Non-sporulating  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph

 

 

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