PROJECT INFORMATION
GOLD Project ID
Gp0323131  
Project Name
Oenococcus oeni AWRIB710  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Genetic diversity in Oenococcus oeni
NCBI BioProject ID 304199
NCBI BioProject Accession PRJNA304199
NCBI Locus Tag
  
NCBI BioSample Accession SAMN04297108
PI
Added By JGI automated process on 2018-07-12
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Industrial
Sequencing Center The Australian Wine Research Institute (Australia)
Collaborating Institute
  
Funding Agency
  
Project Description
Genome sequencing to study genetic diversity in Oenococcus oeni  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications BMC genomics Consensus pan-genome assembly of the specialised wine bacterium Oenococcus oeni.

Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX1542821
Experiment Title Oenococcus oeni strain AWRIB710
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection unspecified
Library Name AWRIB710
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
PROJECT COMPOSITION
Study Genetic diversity in Oenococcus oeni revealed through multi-strain genome sequencing
Organism Oenococcus oeni AWRIB710
Analysis Projects Oenococcus oeni AWRIB710
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0454821
Organism Name
Oenococcus oeni AWRIB710  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Oenococcus  
Genus Synonyms
  
Species
Oenococcus oeni  
Subspecies
  
Species Synonyms
  
Strain
AWRIB710  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1247
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Leuconostocaceae  
NCBI Genus
Oenococcus  
NCBI Species
Oenococcus oeni  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Food production  
Ecosystem Type
Fermented beverages  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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