PROJECT INFORMATION
GOLD Project ID
Gp0316987  
Project Name
Oceaniglobus indicus 1-19b  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Oceaniglobus indicus 1-19b genome sequencing
NCBI BioProject ID 392987
NCBI BioProject Accession PRJNA392987
NCBI Locus Tag
CFP68  
NCBI BioSample Accession SAMN07313546
PI
Added By JGI automated process on 2018-05-24
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center Key Laboratory of Marine Biogenetic Resources State of Oceanic Administration
Collaborating Institute
  
Funding Agency
  
Project Description
Genome sequence of Oceaniovalibus sp. (MCCC 1A11863)  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications International journal of systematic and evolutionary microbiology 67(12):4930-4935 Oceaniglobus indicus gen. nov., sp. nov., a member of the family Rhodobacteraceae isolated from surface seawater.
Other Publications
  
PROJECT COMPOSITION
Study Oceaniglobus indicus 1-19b genome sequencing
Organism Oceaniglobus indicus 1-19b
Analysis Projects Oceaniglobus indicus 1-19b
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0452561
Organism Name
Oceaniglobus indicus 1-19b  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Oceaniglobus  
Genus Synonyms
  
Species
Oceaniglobus indicus  
Subspecies
  
Species Synonyms
  
Strain
1-19b  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
MCCC 1A11863  
Type Strain
  
Exemplar DOI
10.1601/ex.31060  
Exemplar Name
Oceaniglobus indicus  
Taxon DOI
10.1601/tx.31060  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 2047749
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodobacterales  
NCBI Family
Rhodobacteraceae  
NCBI Genus
Oceaniglobus  
NCBI Species
Oceaniglobus indicus  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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