PROJECT INFORMATION
GOLD Project ID
Gp0315721  
Project Name
Acetobacter pomorum BDGP5  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Acetobacter pomorum BDGP5 genome sequencing
NCBI BioProject ID 397225
NCBI BioProject Accession PRJNA397225
NCBI Locus Tag
CPF11  
NCBI BioSample Accession SAMN07682859
PI
Added By JGI automated process on 2018-05-24
Last Modified By Hema Katta on 2018-08-23
Project Comments
  
Project Status
Complete and Published  
Project Relevance Model Organism
Sequencing Center Lawrence Berkeley National Laboratory (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Bacteria isolated from the feces of adult Drosophila melanogaster, Oregon-R-modENCODE strain.  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Genome announcements Complete Genome Sequence of Oregon-R-modENCODE Strain BDGP5, an Acetic Acid Bacterium Found in the Gut.
Other Publications
  
PROJECT COMPOSITION
Study Genome sequencing of Bacteria isolated from the feces of adult Drosophila melanogaster
Organism Acetobacter pomorum BDGP5
Analysis Projects Acetobacter pomorum BDGP5
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) PacBio RS
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0451302
Organism Name
Acetobacter pomorum BDGP5  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Acetobacter  
Genus Synonyms
  
Species
Acetobacter pomorum  
Subspecies
  
Species Synonyms
  
Strain
BDGP5  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 65959
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodospirillales  
NCBI Family
Acetobacteraceae  
NCBI Genus
Acetobacter  
NCBI Species
Acetobacter pomorum  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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