PROJECT INFORMATION
GOLD Project ID
Gp0026961  
Project Name
Spiroplasma chrysopicola DF-1  
Other Names
  
Legacy ER Project ID
33742  
Legacy GOLD ID
Gi23781, Gc0033742  
NCBI BioProject Name Spiroplasma chrysopicola DF-1
NCBI BioProject ID 184747
NCBI BioProject Accession PRJNA184747
NCBI Locus Tag
SCHRY  
NCBI BioSample Accession SAMN02602968
PI
Added By JGI automated process on 2012-10-16
Last Modified By Alejandro Rodriguez Mojica on 2018-07-12
Project Comments
  
Project Status
Complete and Published  
Project Relevance Evolution
Comparative analysis
Sequencing Center Academia Sinica (Taiwan)
Collaborating Institute
  
Funding Agency
  
Project Description
For comparative study of Spiroplasma genome diversity and evolution.  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Genome biology and evolution 5(6):1151-64 Complete genomes of two dipteran-associated spiroplasmas provided insights into the origin, dynamics, and impacts of viral invasion in spiroplasma.
Other Publications
  
PROJECT COMPOSITION
Study Spiroplasma chrysopicola DF-1
Organism Spiroplasma chrysopicola DF-1
Analysis Projects Spiroplasma chrysopicola DF-1
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
29  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0026961
Organism Name
Spiroplasma chrysopicola DF-1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
TENERICUTES  
Genus
Spiroplasma  
Genus Synonyms
  
Species
Spiroplasma chrysopicola  
Subspecies
  
Species Synonyms
  
Strain
DF-1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 43209  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.4782  
Exemplar Name
Spiroplasma chrysopicola ATCC 43209  
Taxon DOI
10.1601/tx.4782  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1276227
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Tenericutes  
NCBI Class
Mollicutes  
NCBI Order
Entomoplasmatales  
NCBI Family
Spiroplasmataceae  
NCBI Genus
Spiroplasma  
NCBI Species
Spiroplasma chrysopicola  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Insecta  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Host
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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