PROJECT INFORMATION
GOLD Project ID
Gp0026525  
Project Name
Paraglaciecola mesophila KMM 241  
Other Names
Glaciecola mesophila KMM 241  
Legacy ER Project ID
33624  
Legacy GOLD ID
Gpto33624, Gi22882  
NCBI BioProject Name Glaciecola mesophila KMM 241
NCBI BioProject ID 176790
NCBI BioProject Accession PRJDB29
NCBI Locus Tag
GMES  
NCBI BioSample Accession SAMD00036602
PI Yu-Zhong Zhang
Added By JGI automated process on 2012-10-16
Last Modified By Supratim Mukherjee on 2017-03-08
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Evolution
Sequencing Center Shandong University (China)
Collaborating Institute
  
Funding Agency
  
Project Description
this genome was sequnced to study the evolution and speciation of genus Glaciecola. no publication yet.  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Glaciecola genome sequencing - Shandong University
Organism Paraglaciecola mesophila KMM 241
Analysis Projects Paraglaciecola mesophila KMM 241
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454 GS FLX
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
44  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0026525
Organism Name
Paraglaciecola mesophila KMM 241  
Other names (alias, synonyms, short names, common names)
Glaciecola mesophila KMM 241  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Paraglaciecola  
Genus Synonyms
Glaciecola  
Species
Paraglaciecola mesophila  
Subspecies
  
Species Synonyms
  
Strain
KMM 241  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
KMM 241  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.2846  
Exemplar Name
Paraglaciecola mesophila  
Taxon DOI
10.1601/tx.25815  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1128912
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Alteromonadales  
NCBI Family
Alteromonadaceae  
NCBI Genus
Paraglaciecola  
NCBI Species
Paraglaciecola mesophila  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Animal  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AJ488501
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?